Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015947074.1_cds_XP_016488945.1_79522
CDS Infomation

[gene=LOC107808897] [db_xref=GeneID:107808897] [protein=tryptophan synthase beta chain 1] [protein_id=XP_016488945.1] [location=join(45192..45536,46614..46970,48648..49090,49237..49331,49537..49712)] [gbkey=CDS]
Sequence

ATGGCCTTCTCCTCCTCCACTGCTCAAACAGCTTCACCTCTATCCTCCAAACATTGCTGC
CGCCTCTCGTCCTCCGCCGCCTCCTCCGCCTCTTACTTCCCTAAATTCCAAATACCCTTC
AAATTCGACAAAACTACATCTTGCCCTTCCTCAATTTCCTGTGTCCTTACCAAACAGGAA
TCAATGGCGGCTCAAGAGGCTGCTGAACCAGCGGTTCTCCTGCGTCCCGATTCGTTTGGC
CGGTTTGGTAAATTTGGCGGGAAATACGTACCTGAAACCCTAATGCACGCTCTTGACGAG
CTTGAGACCGCCTTCAAATCGCTCGCTACCGACGAAGCTTTTCAGAAAGAGCTAGATGGA
ATATTGAGAGATTATGTAGGCAGAGAGAGCCCTCTTTATTTTGCAGAGAGACTTACTGAG
CACTACAAACGTCCAGACGGCGAAGGACCATTGATCTACCTGAAAAGGGAAGATCTTAAC
CACACGGGTGCCCACAAAATCAATAATGCTGTTGCCCAAGCTTTGCTTGCCAAGCGCTTG
GGCAAGAAACGCATCATTGCTGAGACAGGCGCCGGTCAGCATGGTGTTGCTACTGCTACT
GTTTGTGCTCGCTTTGGTTTGGAATGTATTATCTACATGGGTGCTCAAGATATGGAGAGA
CAAGCACTAAATGTCTTCAGAATGCGGCTGCTTGGAGCTGAGGTTAGAGGAGTCCACTCC
GGGACTGCTACGCTCAAGGATGCCACTTCAGAGGCTATAAGGGATTGGGTTACAAATGTT
GAAACAACTCATTACATACTTGGATCTGTTGCAGGACCACATCCGTACCCCATGATGGTA
AGAGAGTTCCATGCGGTGATTGGTAAAGAAACAAGGAAGCAAGCATTGGAAAAATGGGGC
GGGAAACCAGACGTGCTTGTTGCATGTGTTGGTGGAGGCTCAAATGCTATGGGACTGTTT
CATGAGTTTGTTGATGATAAAGATGTTAGGTTGATTGGGGTAGAGGCTGCCGGATTTGGT
ATAGATAGTGGAAAACATGCTGCAACTTTGACTAAGGGAGAGGTCGGAGTACTGCACGGA
GCTATGAGCTATCTGCTGCAAGATGAAGATGGGCAGATAGTTGAGCCCCATTCTATCAGT
GCCGGATTGGATTACCCTGGAGTTGGGCCAGAGCACAGTTTTTTGAAAGATTTAGGACGA
GCAGAGTATTACAGCATTACAGATGAGGAGGCTTTAGAAGCCTTCAAGAGATTATCTCGG
TTAGAGGGCATTATTCCTGCCCTGGAAACATCTCATGCACTGGCTTACTTGGAGAAGTTG
TGTCCAACTCTACCCAATGGAACTAAGGTGGTGCTCAACTGCAGTGGCAGAGGAGATAAG
GATGTTCACACAGCTATTAATTATTTGAAGGTTTAA

Peptide Sequence

PEP ID

XP_016488945.1
PEP Infomation

PREDICTED: tryptophan synthase beta chain 1 [Nicotiana tabacum]
Sequence

MAFSSSTAQTASPLSSKHCCRLSSSAASSASYFPKFQIPFKFDKTTSCPSSISCVLTKQE
SMAAQEAAEPAVLLRPDSFGRFGKFGGKYVPETLMHALDELETAFKSLATDEAFQKELDG
ILRDYVGRESPLYFAERLTEHYKRPDGEGPLIYLKREDLNHTGAHKINNAVAQALLAKRL
GKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRGVHS
GTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHAVIGKETRKQALEKWG
GKPDVLVACVGGGSNAMGLFHEFVDDKDVRLIGVEAAGFGIDSGKHAATLTKGEVGVLHG
AMSYLLQDEDGQIVEPHSISAGLDYPGVGPEHSFLKDLGRAEYYSITDEEALEAFKRLSR
LEGIIPALETSHALAYLEKLCPTLPNGTKVVLNCSGRGDKDVHTAINYLKV

Transcript Sequence

Gene sequence data has not been registered.